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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920320.1_cds_XP_016469474.1_62015
CDS Infomation

[gene=LOC107791848] [db_xref=GeneID:107791848] [protein=pistil-specific extensin-like protein] [protein_id=XP_016469474.1] [location=complement(join(9405..9739,11265..12210))] [gbkey=CDS]
Sequence

ATGGCTGTTATTATTTCATCGAAGGTCCTACTTATACAACTTTTCGTTCTAGTACTTGGC
TCATTCTCAAAGCTCAGCCATGGGGAGCTGTGGCTGGAACTCCCATTGCCTTTCGACTGG
CCACCAGCGGAGATCCCATTGCCGGATATCCCATCGCCTTTCGATGGGCCTACATTCGTG
CTACCGCCACCGTCACCATTGCCATCACCACCTCCGCCATCTCCATCACCACCTCCGCCA
TCACCATCACCACCTCCTCCGTCGACAATACCACTTATTCCTCCTTTTACCGGCGGCTTT
TTGCCTCCTTTGCCCGGCTCTAAGCTTCCTGATTTTGCCGGCCTTTTGCCTCTGATTCCC
AACTTACCTGATGTGCCTCCCATAGGTGGTGGTCCACCTGTTAACCAGCCAAAGCCGTCG
TCACCATCACCCCTAGTTAAGCCGCCACCACCACCACCTTCACCATGTAAGCCATCACCA
CCTGATCAGTCTGCAAAGCAACCACCACAACCTCCTCCAGCAAAACAACCATCACCTCCA
CCTCCTCCACCACCAGTTAAGGCACCATCTCCATCTCCAGCAAAGCAACCACCACCTCCT
CCACCGCCAGTTAAGGCACCATCTCCATCTCCAGCCACTCAGCCACCTACAAAGCAACCG
CCACCGCCGCCACGTGCTAAGAAATCGCCTCTTCTACCTCCTCCGCCACCAGTTGCTTAT
CCGCCAGTTATGACACCATCTCCATCACCGGCTGCTGAGCCACCTATTATAGCACCATTT
CCATCACCACCAGCGAATCCACCCCTCATTCCCCGTCGACCAGCACCACCAGTAGTTAAG
CCGCTTCCACCTTTGGGGAAGCCCCCAATCGTCAGTGGCCTTGTTTATTGTAAATCCTGC
AACAGCTATGGGGTTCCCACTCTGCTCAACGCCTCCCTACTCCAAGGAGCTGTTGTGAAA
CTAATTTGCTACGGAAAAAAAACAATGGTTCAATGGGCCACGACAGACAACAAAGGTGAG
TTTCGGATCATGCCCAAATCTTTAACCACAGCAGATGTTGGCAAGTGCAAGGTATATTTA
GTGAAATCACCAAATCCAAATTGCAATGTCCCAACAAATTTCAATGGTGGAAAATCTGGT
GGTTTATTGAAGCCTCTCCTACCACCTAAACAACCGATTACCCCTGCCGTTGTCCCTGTC
CAACCACCCATGTCTGATTTATATGGTGTTGGACCTTTTATATTTGAAGCCTCCAGCAAA
ATGCCATGCGATAAGAATTGA

Peptide Sequence

PEP ID

XP_016469474.1
PEP Infomation

PREDICTED: pistil-specific extensin-like protein [Nicotiana tabacum]
Sequence

MAVIISSKVLLIQLFVLVLGSFSKLSHGELWLELPLPFDWPPAEIPLPDIPSPFDGPTFV
LPPPSPLPSPPPPSPSPPPPSPSPPPPSTIPLIPPFTGGFLPPLPGSKLPDFAGLLPLIP
NLPDVPPIGGGPPVNQPKPSSPSPLVKPPPPPPSPCKPSPPDQSAKQPPQPPPAKQPSPP
PPPPPVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAY
PPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKPPIVSGLVYCKSC
NSYGVPTLLNASLLQGAVVKLICYGKKTMVQWATTDNKGEFRIMPKSLTTADVGKCKVYL
VKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVPVQPPMSDLYGVGPFIFEASSK
MPCDKN

Transcript Sequence

Gene sequence data has not been registered.